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doxygen: fix doxygen generation and inital pydoc generation

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Signed-off-by: Brendan Le Foll <brendan.le.foll@intel.com>
This commit is contained in:
Brendan Le Foll 2014-04-30 18:43:32 +01:00
parent 21991e3598
commit edf88ef6a7
4 changed files with 496 additions and 20 deletions
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7
CMakeLists.txt
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@ -1,9 +1,10 @@
cmake_minimum_required (VERSION 2.8)
project (upm)
set (SWIG_EXECUTABLE /usr/bin/swig)
find_package (SWIG REQUIRED)
include (${SWIG_USE_FILE})
find_package (SWIG)
if (SWIG_FOUND)
include (${SWIG_USE_FILE})
endif ()
find_package (PkgConfig REQUIRED)
pkg_check_modules (MAA maa>=0.2.1)

457
src/doxy2swig.py Executable file
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@ -0,0 +1,457 @@
#!/usr/bin/env python
"""Doxygen XML to SWIG docstring converter.
Usage:
doxy2swig.py [options] input.xml output.i
Converts Doxygen generated XML files into a file containing docstrings
that can be used by SWIG-1.3.x. Note that you need to get SWIG
version > 1.3.23 or use Robin Dunn's docstring patch to be able to use
the resulting output.
input.xml is your doxygen generated XML file and output.i is where the
output will be written (the file will be clobbered).
"""
#
#
# This code is implemented using Mark Pilgrim's code as a guideline:
# http://www.faqs.org/docs/diveintopython/kgp_divein.html
#
# Author: Prabhu Ramachandran
# License: BSD style
#
# Thanks:
# Johan Hake: the include_function_definition feature
# Bill Spotz: bug reports and testing.
# Sebastian Henschel: Misc. enhancements.
#
#
from xml.dom import minidom
import re
import textwrap
import sys
import os.path
import optparse
def my_open_read(source):
if hasattr(source, "read"):
return source
else:
return open(source)
def my_open_write(dest):
if hasattr(dest, "write"):
return dest
else:
return open(dest, 'w')
class Doxy2SWIG:
"""Converts Doxygen generated XML files into a file containing
docstrings that can be used by SWIG-1.3.x that have support for
feature("docstring"). Once the data is parsed it is stored in
self.pieces.
"""
def __init__(self, src, include_function_definition=True, quiet=False):
"""Initialize the instance given a source object. `src` can
be a file or filename. If you do not want to include function
definitions from doxygen then set
`include_function_definition` to `False`. This is handy since
this allows you to use the swig generated function definition
using %feature("autodoc", [0,1]).
"""
f = my_open_read(src)
self.my_dir = os.path.dirname(f.name)
self.xmldoc = minidom.parse(f).documentElement
f.close()
self.pieces = []
self.pieces.append('\n// File: %s\n' %
os.path.basename(f.name))
self.space_re = re.compile(r'\s+')
self.lead_spc = re.compile(r'^(%feature\S+\s+\S+\s*?)"\s+(\S)')
self.multi = 0
self.ignores = ['inheritancegraph', 'param', 'listofallmembers',
'innerclass', 'name', 'declname', 'incdepgraph',
'invincdepgraph', 'programlisting', 'type',
'references', 'referencedby', 'location',
'collaborationgraph', 'reimplements',
'reimplementedby', 'derivedcompoundref',
'basecompoundref']
#self.generics = []
self.include_function_definition = include_function_definition
if not include_function_definition:
self.ignores.append('argsstring')
self.quiet = quiet
def generate(self):
"""Parses the file set in the initialization. The resulting
data is stored in `self.pieces`.
"""
self.parse(self.xmldoc)
def parse(self, node):
"""Parse a given node. This function in turn calls the
`parse_<nodeType>` functions which handle the respective
nodes.
"""
pm = getattr(self, "parse_%s" % node.__class__.__name__)
pm(node)
def parse_Document(self, node):
self.parse(node.documentElement)
def parse_Text(self, node):
txt = node.data
txt = txt.replace('\\', r'\\\\')
txt = txt.replace('"', r'\"')
# ignore pure whitespace
m = self.space_re.match(txt)
if m and len(m.group()) == len(txt):
pass
else:
self.add_text(textwrap.fill(txt, break_long_words=False))
def parse_Element(self, node):
"""Parse an `ELEMENT_NODE`. This calls specific
`do_<tagName>` handers for different elements. If no handler
is available the `generic_parse` method is called. All
tagNames specified in `self.ignores` are simply ignored.
"""
name = node.tagName
ignores = self.ignores
if name in ignores:
return
attr = "do_%s" % name
if hasattr(self, attr):
handlerMethod = getattr(self, attr)
handlerMethod(node)
else:
self.generic_parse(node)
#if name not in self.generics: self.generics.append(name)
def parse_Comment(self, node):
"""Parse a `COMMENT_NODE`. This does nothing for now."""
return
def add_text(self, value):
"""Adds text corresponding to `value` into `self.pieces`."""
if isinstance(value, (list, tuple)):
self.pieces.extend(value)
else:
self.pieces.append(value)
def get_specific_nodes(self, node, names):
"""Given a node and a sequence of strings in `names`, return a
dictionary containing the names as keys and child
`ELEMENT_NODEs`, that have a `tagName` equal to the name.
"""
nodes = [(x.tagName, x) for x in node.childNodes
if x.nodeType == x.ELEMENT_NODE and
x.tagName in names]
return dict(nodes)
def generic_parse(self, node, pad=0):
"""A Generic parser for arbitrary tags in a node.
Parameters:
- node: A node in the DOM.
- pad: `int` (default: 0)
If 0 the node data is not padded with newlines. If 1 it
appends a newline after parsing the childNodes. If 2 it
pads before and after the nodes are processed. Defaults to
0.
"""
npiece = 0
if pad:
npiece = len(self.pieces)
if pad == 2:
self.add_text('\n')
for n in node.childNodes:
self.parse(n)
if pad:
if len(self.pieces) > npiece:
self.add_text('\n')
def space_parse(self, node):
self.add_text(' ')
self.generic_parse(node)
do_ref = space_parse
do_emphasis = space_parse
do_bold = space_parse
do_computeroutput = space_parse
do_formula = space_parse
def do_compoundname(self, node):
self.add_text('\n\n')
data = node.firstChild.data
self.add_text('%%feature("docstring") %s "\n' % data)
def do_compounddef(self, node):
kind = node.attributes['kind'].value
if kind in ('class', 'struct'):
prot = node.attributes['prot'].value
if prot != 'public':
return
names = ('compoundname', 'briefdescription',
'detaileddescription', 'includes')
first = self.get_specific_nodes(node, names)
for n in names:
if first.has_key(n):
self.parse(first[n])
self.add_text(['";', '\n'])
for n in node.childNodes:
if n not in first.values():
self.parse(n)
elif kind in ('file', 'namespace'):
nodes = node.getElementsByTagName('sectiondef')
for n in nodes:
self.parse(n)
def do_includes(self, node):
self.add_text('C++ includes: ')
self.generic_parse(node, pad=1)
def do_parameterlist(self, node):
text = 'unknown'
for key, val in node.attributes.items():
if key == 'kind':
if val == 'param':
text = 'Parameters'
elif val == 'exception':
text = 'Exceptions'
elif val == 'retval':
text = 'Returns'
else:
text = val
break
self.add_text(['\n', '\n', text, ':', '\n'])
self.generic_parse(node, pad=1)
def do_para(self, node):
self.add_text('\n')
self.generic_parse(node, pad=1)
def do_parametername(self, node):
self.add_text('\n')
try:
data = node.firstChild.data
except AttributeError: # perhaps a <ref> tag in it
data = node.firstChild.firstChild.data
if data.find('Exception') != -1:
self.add_text(data)
else:
self.add_text("%s: " % data)
def do_parameterdefinition(self, node):
self.generic_parse(node, pad=1)
def do_detaileddescription(self, node):
self.generic_parse(node, pad=1)
def do_briefdescription(self, node):
self.generic_parse(node, pad=1)
def do_memberdef(self, node):
prot = node.attributes['prot'].value
id = node.attributes['id'].value
kind = node.attributes['kind'].value
tmp = node.parentNode.parentNode.parentNode
compdef = tmp.getElementsByTagName('compounddef')[0]
cdef_kind = compdef.attributes['kind'].value
if prot == 'public':
first = self.get_specific_nodes(node, ('definition', 'name'))
name = first['name'].firstChild.data
if name[:8] == 'operator': # Don't handle operators yet.
return
if not 'definition' in first or \
kind in ['variable', 'typedef']:
return
if self.include_function_definition:
defn = first['definition'].firstChild.data
else:
defn = ""
self.add_text('\n')
self.add_text('%feature("docstring") ')
anc = node.parentNode.parentNode
if cdef_kind in ('file', 'namespace'):
ns_node = anc.getElementsByTagName('innernamespace')
if not ns_node and cdef_kind == 'namespace':
ns_node = anc.getElementsByTagName('compoundname')
if ns_node:
ns = ns_node[0].firstChild.data
self.add_text(' %s::%s "\n%s' % (ns, name, defn))
else:
self.add_text(' %s "\n%s' % (name, defn))
elif cdef_kind in ('class', 'struct'):
# Get the full function name.
anc_node = anc.getElementsByTagName('compoundname')
cname = anc_node[0].firstChild.data
self.add_text(' %s::%s "\n%s' % (cname, name, defn))
for n in node.childNodes:
if n not in first.values():
self.parse(n)
self.add_text(['";', '\n'])
def do_definition(self, node):
data = node.firstChild.data
self.add_text('%s "\n%s' % (data, data))
def do_sectiondef(self, node):
kind = node.attributes['kind'].value
if kind in ('public-func', 'func', 'user-defined', ''):
self.generic_parse(node)
def do_header(self, node):
"""For a user defined section def a header field is present
which should not be printed as such, so we comment it in the
output."""
data = node.firstChild.data
self.add_text('\n/*\n %s \n*/\n' % data)
# If our immediate sibling is a 'description' node then we
# should comment that out also and remove it from the parent
# node's children.
parent = node.parentNode
idx = parent.childNodes.index(node)
if len(parent.childNodes) >= idx + 2:
nd = parent.childNodes[idx + 2]
if nd.nodeName == 'description':
nd = parent.removeChild(nd)
self.add_text('\n/*')
self.generic_parse(nd)
self.add_text('\n*/\n')
def do_simplesect(self, node):
kind = node.attributes['kind'].value
if kind in ('date', 'rcs', 'version'):
pass
elif kind == 'warning':
self.add_text(['\n', 'WARNING: '])
self.generic_parse(node)
elif kind == 'see':
self.add_text('\n')
self.add_text('See: ')
self.generic_parse(node)
else:
self.generic_parse(node)
def do_argsstring(self, node):
self.generic_parse(node, pad=1)
def do_member(self, node):
kind = node.attributes['kind'].value
refid = node.attributes['refid'].value
if kind == 'function' and refid[:9] == 'namespace':
self.generic_parse(node)
def do_doxygenindex(self, node):
self.multi = 1
comps = node.getElementsByTagName('compound')
for c in comps:
refid = c.attributes['refid'].value
fname = refid + '.xml'
if not os.path.exists(fname):
fname = os.path.join(self.my_dir, fname)
if not self.quiet:
print("parsing file: %s" % fname)
p = Doxy2SWIG(fname, self.include_function_definition, self.quiet)
p.generate()
self.pieces.extend(self.clean_pieces(p.pieces))
def write(self, fname):
o = my_open_write(fname)
if self.multi:
o.write("".join(self.pieces))
else:
o.write("".join(self.clean_pieces(self.pieces)))
o.close()
def clean_pieces(self, pieces):
"""Cleans the list of strings given as `pieces`. It replaces
multiple newlines by a maximum of 2 and returns a new list.
It also wraps the paragraphs nicely.
"""
ret = []
count = 0
for i in pieces:
if i == '\n':
count = count + 1
else:
if i == '";':
if count:
ret.append('\n')
elif count > 2:
ret.append('\n\n')
elif count:
ret.append('\n' * count)
count = 0
ret.append(i)
_data = "".join(ret)
ret = []
for i in _data.split('\n\n'):
if i == 'Parameters:' or i == 'Exceptions:' or i == 'Returns:':
ret.extend([i, '\n' + '-' * len(i), '\n\n'])
elif i.find('// File:') > -1: # leave comments alone.
ret.extend([i, '\n'])
else:
_tmp = textwrap.fill(i.strip(), break_long_words=False)
_tmp = self.lead_spc.sub(r'\1"\2', _tmp)
ret.extend([_tmp, '\n\n'])
return ret
def convert(input, output, include_function_definition=True, quiet=False):
p = Doxy2SWIG(input, include_function_definition, quiet)
p.generate()
p.write(output)
def main():
usage = __doc__
parser = optparse.OptionParser(usage)
parser.add_option("-n", '--no-function-definition',
action='store_true',
default=False,
dest='func_def',
help='do not include doxygen function definitions')
parser.add_option("-q", '--quiet',
action='store_true',
default=False,
dest='quiet',
help='be quiet and minimize output')
options, args = parser.parse_args()
if len(args) != 2:
parser.error("error: no input and output specified")
convert(args[0], args[1], not options.func_def, options.quiet)
if __name__ == '__main__':
main()

43
src/hmc5883l/CMakeLists.txt
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@ -1,22 +1,35 @@
set (libname "hmc5883l")
add_library (hmc5883l SHARED hmc5883l.cxx)
include_directories (${MAA_INCLUDE_DIR})
target_link_libraries (hmc5883l ${MAA_LIBRARIES})
find_package (PythonLibs)
if (DOXYGEN_FOUND AND SWIG_FOUND)
find_package (PythonLibs)
include_directories (
${PYTHON_INCLUDE_PATH}
${PYTHON_INCLUDE_DIRS}
${MAA_INCLUDE_DIR}
.
)
include_directories (
${PYTHON_INCLUDE_PATH}
${PYTHON_INCLUDE_DIRS}
${MAA_INCLUDE_DIR}
.
)
set_source_files_properties (pyupm_hmc5883l.i PROPERTIES CPLUSPLUS ON)
set_source_files_properties (jsupm_hmc5883l.i PROPERTIES CPLUSPLUS ON)
set_source_files_properties (pyupm_hmc5883l.i PROPERTIES CPLUSPLUS ON)
set_source_files_properties (jsupm_hmc5883l.i PROPERTIES CPLUSPLUS ON)
swig_add_module (pyupm_hmc5883l python pyupm_hmc5883l.i hmc5883l.cxx)
swig_add_module (jsupm_hmc5883l python jsupm_hmc5883l.i hmc5883l.cxx)
swig_link_libraries (pyupm_hmc5883l ${PYTHON_LIBRARIES} ${MAA_LIBRARIES})
swig_link_libraries (jsupm_hmc5883l ${PYTHON_LIBRARIES} ${MAA_LIBRARIES})
swig_add_module (pyupm_hmc5883l python pyupm_hmc5883l.i hmc5883l.cxx)
swig_add_module (jsupm_hmc5883l python jsupm_hmc5883l.i hmc5883l.cxx)
swig_link_libraries (pyupm_hmc5883l ${PYTHON_LIBRARIES} ${MAA_LIBRARIES})
swig_link_libraries (jsupm_hmc5883l ${PYTHON_LIBRARIES} ${MAA_LIBRARIES})
set (CMAKE_SWIG_FLAGS -DDOXYGEN=${DOXYGEN_FOUND})
add_custom_command (OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/${libname}_doc.i
COMMAND ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/../doxy2swig.py -n
${CMAKE_BINARY_DIR}/xml/${libname}_8h.xml
${CMAKE_CURRENT_BINARY_DIR}/${libname}_doc.i
DEPENDS ${CMAKE_BINARY_DIR}/xml/${libname}_8h.xml
)
add_custom_target (${libname}doc_i DEPENDS ${CMAKE_CURRENT_BINARY_DIR}/${libname}_doc.i)
add_dependencies (${libname}doc_i doc)
add_dependencies (${SWIG_MODULE_pyupm_hmc5883l_REAL_NAME} ${libname}doc_i)
endif ()

9
src/hmc5883l/pyupm_hmc5883l.i
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@ -1,7 +1,12 @@
%module pyupm_hmc5883l
%feature("autodoc", "3");
#ifdef DOXYGEN
%include "hmc5883l_doc.i"
#endif
%include "hmc5883l.h"
%{
#include "hmc5883l.h"
%}
%include "hmc5883l.h"